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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31482100_31484814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31482100 - 31484814

Intron Length:

2715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

ATCTGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TATGCTTCATCT

Flanking Amino Acid:

SFKKRLFEVTESSVSSSSPG

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.9

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

81.7

0.71

0.9

41.6

Minor 5ss

37.1

-1.5

3.2

48.4

47.2

Minor BPS

51.2

0.12

1.9

73.17

43.8

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023749

31285911 - 31545947

260037

ENSAPLT00000034432

31317163 - 31502813

185651

ENSAPLT00000019909

31272996 - 31545947

272952

ENSAPLT00000026783

31285911 - 31502813

216903

ENSAPLT00000010214

31248862 - 31685213

436352

ENSAPLT00000024368

31248862 - 31504412

255551

ENSAPLT00000044846

31248862 - 31685248

436387

ENSAPLT00000023873

31409498 - 31560335

150838

ENSAPLT00000038011

31248862 - 31503432

254571