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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31545906_31554472_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31545906 - 31554472

Intron Length:

8567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAG

U12 Branch Point Sequence:

TGTCAGTGGAAT

Flanking Amino Acid:

QETGLLNKCERIRGRKASLE

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

60.9

0.27

1.7

71.4

45.1

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

39.9

-0.7

2.3

60.81

42.1

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044846

31248862 - 31685248

436387

ENSAPLT00000010214

31248862 - 31685213

436352