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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31545906_31560281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31545906 - 31560281

Intron Length:

14376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTAATATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTCTTTAATA

Flanking Amino Acid:

QETGLLNKCEETCLKNSFPC

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.5

0.9

66.4

38.6

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

1.19

0.8

91.01

22.8

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023873

31409498 - 31560335

150838