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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31560332_31575106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31560332 - 31575106

Intron Length:

14775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCTT

U12 Branch Point Sequence:

TCTCCCTTGCCC

Flanking Amino Acid:

FSLLPCGGLGVDSDTVWNEL

Intron Amino Acid Position:

761

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

38.6

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

70.5

0.46

68.5

42.1

Minor 5ss

34.7

-1.7

2.6

34.1

41.4

Minor BPS

46.9

-0.2

3.5

71.26

40.4

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044846

31248862 - 31685248

436387

ENSAPLT00000010214

31248862 - 31685213

436352