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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31575215_31586523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31575215 - 31586523

Intron Length:

11309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTCC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTGTTCTTACAG

Flanking Amino Acid:

AARVASRELKNGFAVVRPPG

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

85.9

0.81

0.8

79.9

32.2

Minor 5ss

32.6

-2

3.2

41.8

45.1

Minor BPS

56.4

0.06

1.8

63.83

44.2

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044846

31248862 - 31685248

436387

ENSAPLT00000010214

31248862 - 31685213

436352