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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31586580_31586833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31586580 - 31586833

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCCTATTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GCTTTCTTATTT

Flanking Amino Acid:

PGHHAEESTAMGFCFFNSIA

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

73.6

0.53

0.8

67.4

32.2

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

63.6

0.51

1.6

75.8

41.6

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044846

31248862 - 31685248

436387

ENSAPLT00000010214

31248862 - 31685213

436352