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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31586922_31591344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31586922 - 31591344

Intron Length:

4423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

ACATTATTACAT

Flanking Amino Acid:

NIGKILIVDLDVHHGNGTQQ

Intron Amino Acid Position:

845

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

83.3

0.75

0.6

81.8

23.1

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

45.9

-0.2

1.9

61.22

42.2

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010214

31248862 - 31685213

436352

ENSAPLT00000044846

31248862 - 31685248

436387