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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31591465_31591786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31591465 - 31591786

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTCTTCAATT

Flanking Amino Acid:

FFPGSGAPNEVGSGPGEGYN

Intron Amino Acid Position:

885

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.1

80.7

34.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.7

0.8

83.6

31.5

Minor 5ss

-1.2

3.3

56.2

Minor BPS

70.9

0.73

1.5

83.73

37.9

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044846

31248862 - 31685248

436387

ENSAPLT00000010214

31248862 - 31685213

436352