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Intron Name: Anas_platyrhynchos_platyrhynchos_2_31591885_31628413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31591885 - 31628413

Intron Length:

36529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTACC

5'SS Class:

major

3'SS Sequence:

TTTCACTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTCACT

Flanking Amino Acid:

MGDVEYLTAFRTVIMPAANE

Intron Amino Acid Position:

917

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.2

70.9

39.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

86.4

0.82

0.8

80.2

31.5

Minor 5ss

-2.1

2.7

38.2

39.5

Minor BPS

72.2

0.78

1.7

90.89

33.1

Associated Gene:

Gene:

HDAC9

Ensembl Gene ID:

ENSAPLG00000009768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044846

31248862 - 31685248

436387

ENSAPLT00000010214

31248862 - 31685213

436352