Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_31736679_31736938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31736679 - 31736938

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

ACTTCCTCTACC

Flanking Amino Acid:

AADEPCSPAQGPTERRAGLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.9

72.3

42.1

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

76.9

0.61

0.9

70.2

Minor 5ss

25.4

-2.8

4.1

37.8

47.1

Minor BPS

58.2

0.24

1.9

69.47

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029249

31736088 - 31738441

2354