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Intron Name: Anas_platyrhynchos_platyrhynchos_2_3176054_3176261_F

Intron Information:

Intron Rank:

141665

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3176054 - 3176261

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

CAG|GTTTTCCCA

5'SS Class:

weak_major

3'SS Sequence:

CTGCTTCCCAATG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

GCTGTTTGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.2

49.1

41.1

Major BPS

70.8

0.52

70.6

31.6

Major PPT

37.5

-0.7

3.1

55.5

34.2

Minor 5ss

40.7

-1

2.7

45.8

Minor BPS

46.3

-0.2

1.8

60.21

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030097

3175021 - 3177113

2093