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Intron Name: Anas_platyrhynchos_platyrhynchos_2_32613418_32615169_F

Intron Information:

Intron Rank:

136290

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32613418 - 32615169

Intron Length:

1752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTGT

5'SS Class:

weak_major

3'SS Sequence:

ATCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TTTTCCTAAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

64.2

42.4

Major BPS

72.7

0.57

72.1

31.1

Major PPT

85.9

0.81

0.7

81.1

30.2

Minor 5ss

56.1

0.21

2.4

74.2

42.1

Minor BPS

73.7

0.61

1.7

79.08

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025148

32613216 - 32616400

3185