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Intron Name: Anas_platyrhynchos_platyrhynchos_2_32716662_32717700_F

Intron Information:

Intron Rank:

130977

Intron Class:

major

Intron Phase:

Intron Coordinates:

32716662 - 32717700

Intron Length:

1039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

AAGTTATTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

76.4

32.8

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

28.3

-2.5

3.6

40.1

46.3

Minor BPS

60.6

0.41

1.6

72.38

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033417

32713480 - 32718349

4870

ENSAPLT00000029939

32715983 - 32718349

2367