Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_32761206_32775063_F

Intron Information:

Intron Rank:

142336

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

32761206 - 32775063

Intron Length:

13858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATT

5'SS Class:

strong_major

3'SS Sequence:

GCGTGCTTCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTATTATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

84.9

32.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

56.4

0.15

1.1

54.9

39.4

Minor 5ss

37.6

-1.4

3.5

56.9

47.4

Minor BPS

48.7

-0

1.8

72.79

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032046

32760992 - 32775323

14332