Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_32809694_32810145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32809694 - 32810145

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

CTCTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTGCCTTTAACT

Flanking Amino Acid:

EDVKSALLDPDWICPPCRGV

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

79.3

34.5

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

85.8

0.81

0.7

80.4

24.9

Minor 5ss

42.5

-0.8

2.8

60.5

37.7

Minor BPS

80.3

1.03

1.1

89.35

35.1

Associated Gene:

Gene:

CDCA7L

Ensembl Gene ID:

ENSAPLG00000011101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026269

32808862 - 32823683

14822

ENSAPLT00000011579

32809553 - 32829275

19723