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Intron Name: Anas_platyrhynchos_platyrhynchos_2_32812015_32812448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32812015 - 32812448

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CATCTATAGATT

Flanking Amino Acid:

PVKTPASTPSKQRKIPRRAF

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

82.1

37.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

90.5

0.91

0.6

84.8

Minor 5ss

40.6

-1

3.1

60.2

44.1

Minor BPS

43.3

-0.4

1.8

57.57

39.5

Associated Gene:

Gene:

CDCA7L

Ensembl Gene ID:

ENSAPLG00000011101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026269

32808862 - 32823683

14822

ENSAPLT00000011579

32809553 - 32829275

19723