Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_32814333_32814763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32814333 - 32814763

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATGTATA

5'SS Class:

major

3'SS Sequence:

TTGCTTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

AGGTTCATACTT

Flanking Amino Acid:

VKKKGVLVKTEMESDMSDEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

73.8

36.6

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

78.6

0.64

0.8

74.2

Minor 5ss

47.6

-0.2

2.5

40.2

Minor BPS

47.3

-0.1

1.8

63.36

41.3

Associated Gene:

Gene:

CDCA7L

Ensembl Gene ID:

ENSAPLG00000011101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026269

32808862 - 32823683

14822

ENSAPLT00000011579

32809553 - 32829275

19723