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Intron Name: Anas_platyrhynchos_platyrhynchos_2_32888652_32891850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32888652 - 32891850

Intron Length:

3199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGCTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTCCCTTATTT

Flanking Amino Acid:

KIPFMPLLLKDVTFIHEGNK

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.9

45.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

100

1.12

0.4

100

Minor 5ss

40.5

-1.1

3.3

55.9

48.3

Minor BPS

0.83

1.5

89.57

34.9

Associated Gene:

Gene:

RAPGEF5

Ensembl Gene ID:

ENSAPLG00000011214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011723

32879849 - 32940071

60223