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Intron Name: Anas_platyrhynchos_platyrhynchos_2_32908475_32909210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32908475 - 32909210

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

ATGATTTGGATT

Flanking Amino Acid:

FQKILGMHRRHTVDEYSPHR

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

89.4

0.89

0.8

29.4

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

47.4

-0.1

1.4

61.4

36.8

Associated Gene:

Gene:

RAPGEF5

Ensembl Gene ID:

ENSAPLG00000011214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011723

32879849 - 32940071

60223