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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33126611_33128884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33126611 - 33128884

Intron Length:

2274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GGCACTTTAATA

Flanking Amino Acid:

KHLATTIRQMVINPDEVVIP

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.7

0.76

0.8

79.2

32.9

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

60.7

0.33

1.3

61.38

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011754

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043300

33125588 - 33129076

3489

ENSAPLT00000012229

33125832 - 33129076

3245