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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33183563_33183973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33183563 - 33183973

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGTATTTTGAAT

Flanking Amino Acid:

SLSKPSVYHEPSSIGSMALT

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

56.6

0.29

1.4

73.08

37.6

Associated Gene:

Gene:

FAM126A

Ensembl Gene ID:

ENSAPLG00000011766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012311

33172259 - 33192250

19992

ENSAPLT00000027992

33172259 - 33192250

19992