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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33281347_33286231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33281347 - 33286231

Intron Length:

4885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

CTTTTCTATCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

GCTTTTCTATCC

Flanking Amino Acid:

VEVVLCAAATRFQDVLSNGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.34

1.3

62.3

43.9

Major BPS

73.8

0.59

1.3

72.8

Major PPT

84.5

0.78

0.8

77.5

35.9

Minor 5ss

32.4

-2

2.9

38.2

39.5

Minor BPS

47.3

-0.2

1.9

58.83

40.5

Associated Gene:

Gene:

GPNMB

Ensembl Gene ID:

ENSAPLG00000013155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013705

33281012 - 33297714

16703