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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33287229_33288537_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33287229 - 33288537

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTACATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TGTTTCTACATT

Flanking Amino Acid:

NIIYKRNCTPDFPASQDQYV

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

70.2

0.5

1.1

77.2

Major PPT

76.8

0.6

0.9

75.4

33.6

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

51.6

0.13

2.1

75.64

41.8

Associated Gene:

Gene:

GPNMB

Ensembl Gene ID:

ENSAPLG00000013155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013705

33281012 - 33297714

16703