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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33288712_33289810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33288712 - 33289810

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTTAGTACT

5'SS Class:

major

3'SS Sequence:

TGTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

CATATTACAAGT

Flanking Amino Acid:

RHFVYLFHTFGQYYEIIGRS

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

76.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

83.3

0.75

0.9

80.8

36.8

Minor 5ss

35.2

-1.7

2.6

46.8

Minor BPS

40.3

-0.6

1.9

54.33

41.4

Associated Gene:

Gene:

GPNMB

Ensembl Gene ID:

ENSAPLG00000013155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013705

33281012 - 33297714

16703