Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_33309765_33310690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33309765 - 33310690

Intron Length:

926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACTG

5'SS Class:

major

3'SS Sequence:

TTCTGTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

ATGGCATCATCA

Flanking Amino Acid:

KITGHFYACQLAQRKIQEIL

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.4

45.1

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

83.9

0.76

0.8

81.3

30.8

Minor 5ss

34.2

-1.8

3.5

46.9

48.4

Minor BPS

43.5

-0.4

55.21

43.4

Associated Gene:

Gene:

IGF2BP3

Ensembl Gene ID:

ENSAPLG00000013290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019595

33309663 - 33393775

84113

ENSAPLT00000013864

33309663 - 33416817

107155