Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_33350875_33392894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33350875 - 33392894

Intron Length:

42020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAAAATTGAAAT

Flanking Amino Acid:

RNIPPHLQWEVLDSLLAQYG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

80.7

33.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

66.9

0.38

0.9

63.6

31.5

Minor 5ss

33.7

-1.9

3.3

47.7

Minor BPS

46.7

-0.1

1.7

62.74

40.2

Associated Gene:

Gene:

IGF2BP3

Ensembl Gene ID:

ENSAPLG00000013290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013864

33309663 - 33416817

107155

ENSAPLT00000019595

33309663 - 33393775

84113