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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33438881_33438984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33438881 - 33438984

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGGAGT

5'SS Class:

major

3'SS Sequence:

TTTTTAATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

TPGIYMGRPTQVTPIVSSHK

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

67.5

43.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.5

0.78

0.8

83.2

Minor 5ss

36.2

-1.6

3.3

54.3

43.8

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

TRA2A

Ensembl Gene ID:

ENSAPLG00000013689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024220

33437350 - 33461328

23979