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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33439101_33446522_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33439101 - 33446522

Intron Length:

7422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTCACGTCCACC

Flanking Amino Acid:

YFERIDDSKEAMEHANGMEL

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

85.6

0.8

0.7

80.7

24.6

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

42.6

-0.6

2.5

59.11

45.9

Associated Gene:

Gene:

TRA2A

Ensembl Gene ID:

ENSAPLG00000013689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024220

33437350 - 33461328

23979

ENSAPLT00000014288

33437350 - 33461328

23979