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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33452313_33461292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33452313 - 33461292

Intron Length:

8980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CCATTTGTAATA

Flanking Amino Acid:

DVEENNFEGRESRSQSKSPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.2

0.66

0.9

81.3

30.8

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

47.2

-0.2

54.34

39.6

Associated Gene:

Gene:

TRA2A

Ensembl Gene ID:

ENSAPLG00000013689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024220

33437350 - 33461328

23979

ENSAPLT00000014288

33437350 - 33461328

23979