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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33516236_33517249_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33516236 - 33517249

Intron Length:
1014

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAGGTTCT

5'SS Class:
major

3'SS Sequence:
TAATTCAATCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
CAATCTTTAATA

Flanking Amino Acid:
ICKELKTDLTEHGEAEKGII

Intron Amino Acid Position:
599

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.9
0.42
1.1
66.4
40.1

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
69.3
0.43
1
60.4
44.5

Minor 5ss
43.6
-0.7
3.1
64.3
41

Minor BPS
70.2
0.63
1.2
69.05
37.6

Associated Gene:

Gene:
STK31

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33496883 - 33531253
34371