Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_33522059_33522902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33522059 - 33522902

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTAAATCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATGAACA

Flanking Amino Acid:

LQADTPLTLQETLKVMKGVA

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

60.4

0.24

57.7

42.4

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

53.6

0.11

1.9

70.98

40.5

Associated Gene:

Gene:

STK31

Ensembl Gene ID:

ENSAPLG00000014105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014699

33496883 - 33531253

34371