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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33592999_33605715_F

Intron Information:

Intron Rank:

143863

Intron Class:

major

Intron Phase:

Intron Coordinates:

33592999 - 33605715

Intron Length:

12717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACGT

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

GTTTGTTTATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

75.5

40.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

83.1

0.74

0.9

80.2

37.3

Minor 5ss

33.7

-1.9

3.2

48.4

47.1

Minor BPS

49.6

0.05

2.1

73.69

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040943

33592344 - 33620469

28126