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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33649142_33653855_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33649142 - 33653855

Intron Length:

4714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

AATACGCAAACA

Flanking Amino Acid:

RHYINLITRQRYGKRSSPET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

80.3

0.68

0.7

79.8

25.6

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

41.3

-0.6

2.4

56.64

42.1

Associated Gene:

Gene:

NPY

Ensembl Gene ID:

ENSAPLG00000014559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015176

33648954 - 33656978

8025