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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33777905_33778956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33777905 - 33778956

Intron Length:

1052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTACATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTTTTTTACAT

Flanking Amino Acid:

SYRDTVIPQQVFVKCHFDYN

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

76.2

39.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

85.3

0.8

82.5

33.5

Minor 5ss

31.5

-2.1

2.5

37.7

39.6

Minor BPS

60.3

0.4

1.7

78.79

37.6

Associated Gene:

Gene:

MPP6

Ensembl Gene ID:

ENSAPLG00000014575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030013

33767444 - 33789725

22282

ENSAPLT00000015231

33765527 - 33789725

24199