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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33831523_33832658_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
33831523 - 33832658

Intron Length:
1136

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAAGGTTT

5'SS Class:
strong_major

3'SS Sequence:
TTCTCTGCTGCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.2
0.78
1
79.5
36.8

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
81.9
0.72
0.8
76.8
31.9

Minor 5ss
42.2
-0.9
3.4
56.2
48

Minor BPS
84.9
1.17
0.8
94.97
24.6

Associated Gene:

Gene:
GSDME

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33799755 - 33832712
32958