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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33850202_33851387_R


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
33850202 - 33851387

Intron Length:
1186

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTATAC

5'SS Class:
major

3'SS Sequence:
TAATCTTTGTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTAAT

U12 Branch Point Sequence:
AACTGTTTAATC

Flanking Amino Acid:
NNLEHQPRFFRKSKDDSWVS

Intron Amino Acid Position:
857

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.7
0.51
1.1
65.1
35.6

Major BPS
81.8
0.79
1.1
84
34.5

Major PPT
69.6
0.44
1
70.1
40.8

Minor 5ss
37.2
-1.4
3.2
50.6
46

Minor BPS
55.3
0.14
1.7
61.21
38.8

Associated Gene:

Gene:
OSBPL3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33850105 - 33915891
65787

33850105 - 33915891
65787