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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33852994_33854303_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33852994 - 33854303

Intron Length:
1310

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGACTCAG

5'SS Class:
major

3'SS Sequence:
CTTTTGATTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TTCCTTTTGATT

Flanking Amino Acid:
TCYCKLTFVKAKYWNPNVNE

Intron Amino Acid Position:
726

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1.1
64.9
42.8

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
78.3
0.64
0.9
70.4
40

Minor 5ss
33.7
-1.9
2.9
40.4
45.7

Minor BPS
62.6
0.48
1.2
75.22
36.1

Associated Gene:

Gene:
OSBPL3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33850105 - 33915891
65787

33850105 - 33915891
65787