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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33883967_33884198_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33883967 - 33884198

Intron Length:
232

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGTAAAG

5'SS Class:
major

3'SS Sequence:
TTTCTGGTTACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TGATTTTTAATT

Flanking Amino Acid:
RKWPLKGWHKRYFFLDRGIL

Intron Amino Acid Position:
71

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.1
64.4
41.5

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
82.1
0.72
0.9
75.8
38.2

Minor 5ss
31.5
-2.1
3.1
39.5
46

Minor BPS
73.2
0.81
1.1
80.88
34.9

Associated Gene:

Gene:
OSBPL3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33850105 - 33915891
65787

33850105 - 33915891
65787