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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33893249_33915764_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
33893249 - 33915764

Intron Length:
22516

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTCAC

5'SS Class:
major

3'SS Sequence:
TTTACCTTCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTAAT

U12 Branch Point Sequence:
ATGTCTTTACCT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1.1
65.7
40.2

Major BPS
83
0.82
0.8
82
24.9

Major PPT
77.1
0.61
0.8
69.9
36.4

Minor 5ss
37.4
-1.4
3
54.6
42.6

Minor BPS
68.7
0.66
1.6
81.85
40.1

Associated Gene:

Gene:
OSBPL3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33850105 - 33915891
65787

33850105 - 33915891
65787