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Intron Name: Anas_platyrhynchos_platyrhynchos_2_33980829_33981065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33980829 - 33981065

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TATATGATAATA

Flanking Amino Acid:

GITTYSRNFTGRGPMNPLIL

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

70.8

0.52

70.6

31.6

Major PPT

65.6

0.35

1.1

69.1

36.4

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

45.8

-0.3

2.2

61.79

38.4

Associated Gene:

Gene:

C7orf31

Ensembl Gene ID:

ENSAPLG00000012025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012515

33977838 - 34001971

24134