Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_33982085_33984244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33982085 - 33984244

Intron Length:

2160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

ATATCCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AACATGTTAAAT

Flanking Amino Acid:

YDVVVLRKTKGNPYRHEVVS

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

75.5

0.57

0.9

71.3

34.9

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

46.1

-0.2

2.1

61.15

42.3

Associated Gene:

Gene:

C7orf31

Ensembl Gene ID:

ENSAPLG00000012025

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012515

33977838 - 34001971

24134