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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34014778_34016525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34014778 - 34016525

Intron Length:

1748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTTTTATTT

Flanking Amino Acid:

REDDDDKYYKIKDNALEEKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.9

0.92

0.7

89.5

26.5

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

58.4

0.34

1.5

71.47

40.5

Associated Gene:

Gene:

NPVF

Ensembl Gene ID:

ENSAPLG00000011937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024573

34013972 - 34016666

2695

ENSAPLT00000012421

34013133 - 34016666

3534