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Intron Name: Anas_platyrhynchos_platyrhynchos_2_3411927_3416636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3411927 - 3416636

Intron Length:

4710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGTC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATGAT

U12 Branch Point Sequence:

TTTTTCTTTCCA

Flanking Amino Acid:

KNESVSSDFKGCTRDWDGLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.2

72.8

38.7

Major BPS

72.3

0.55

1.1

63.4

42.8

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

39.3

-1.2

3.7

58.3

46.6

Minor BPS

46.8

-0.2

3.6

78.67

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010537

3401406 - 3431767

30362