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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34214433_34215401_R

Intron Information:

Intron Rank:

129421

Intron Class:

major

Intron Phase:

Intron Coordinates:

34214433 - 34215401

Intron Length:

969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TTTTCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

CTTCAGTGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

75.9

39.9

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

0.94

0.6

85.2

29.6

Minor 5ss

42.4

-0.8

3.1

39.9

Minor BPS

41.4

-0.5

2.4

63.18

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030828

34210583 - 34215896

5314