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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34462912_34464296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34462912 - 34464296

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

CACTTCTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTATCTTGAACT

Flanking Amino Acid:

DSKSKKKRDSVDKPRGFARG

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

66.7

0.38

0.9

62.4

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

77.1

0.93

1.3

89.99

33.6

Associated Gene:

Gene:

CBX3

Ensembl Gene ID:

ENSAPLG00000011969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032116

34459452 - 34465451

6000

ENSAPLT00000012470

34457155 - 34465451

8297