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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34505538_34507549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34505538 - 34507549

Intron Length:

2012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

AATTTCTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTTTTTCAATT

Flanking Amino Acid:

SYIDYEIFIHTNSMCFTRKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.2

83.2

30.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

72.6

0.51

67.3

38.3

Minor 5ss

35.2

-1.7

2.8

41.6

38.3

Minor BPS

65.2

0.55

1.5

79.05

Associated Gene:

Gene:

SNX10

Ensembl Gene ID:

ENSAPLG00000011904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029643

34504843 - 34517218

12376

ENSAPLT00000012403

34497099 - 34517218

20120