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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34508422_34516129_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34508422 - 34516129

Intron Length:

7708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTCGCTTTTATT

Flanking Amino Acid:

RRQGLQEFLEKILQNALLLS

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

94.5

0.6

29.4

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

57.8

0.33

1.7

75.01

42.5

Associated Gene:

Gene:

SNX10

Ensembl Gene ID:

ENSAPLG00000011904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029643

34504843 - 34517218

12376

ENSAPLT00000012403

34497099 - 34517218

20120