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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34867272_34870457_F

Intron Information:

Intron Rank:

138223

Intron Class:

major

Intron Phase:

Intron Coordinates:

34867272 - 34870457

Intron Length:

3186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

CAAACGCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

79.3

0.66

0.7

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

45.3

-0.2

2.3

63.78

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042878

34867129 - 34870536

3408