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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34899073_34899570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34899073 - 34899570

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGCACGTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAC

U12 Branch Point Sequence:

GTGTGTGCACGT

Flanking Amino Acid:

PWMKKIHVSTVNPNYNGGEP

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.2

38.5

Major BPS

-0

1.5

63.1

44.5

Major PPT

67.2

0.39

1.1

62.9

43.2

Minor 5ss

34.7

-1.7

2.8

35.3

41.4

Minor BPS

31.3

-1.3

2.4

47.67

45.4

Associated Gene:

Gene:

HOXA4

Ensembl Gene ID:

ENSAPLG00000011410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011877

34898739 - 34900177

1439