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Intron Name: Anas_platyrhynchos_platyrhynchos_2_34954432_34954530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34954432 - 34954530

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAAAATA

5'SS Class:

major

3'SS Sequence:

TTAAAACTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ACTACTTTAAAA

Flanking Amino Acid:

SRMLNLTDRQGFSRRD*

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

76.9

31.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

62.5

0.28

55.1

39.8

Minor 5ss

38.1

-1.3

3.2

49.2

41.2

Minor BPS

63.2

0.41

1.4

67.72

38.5

Associated Gene:

Gene:

HOXA11

Ensembl Gene ID:

ENSAPLG00000011282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011740

34954357 - 34956796

2440